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Ectodysplasin A receptor
Ectodysplasin A receptor (EDAR) is a protein that in humans is encoded by the EDAR gene. EDAR is a cell surface receptor for ectodysplasin A which plays an important role in the development of ectodermal tissues such as the skin. It is structurally related to members of the TNF receptor superfamily.
Function
EDAR and other genes provide instructions for making proteins that work together during embryonic development. These proteins form part of a signaling pathway that is critical for the interaction between two cell layers, the ectoderm and the mesoderm. In the early embryo, these cell layers form the basis for many of the body's organs and tissues. Ectoderm-mesoderm interactions are essential for the proper formation of several structures that arise from the ectoderm, including the skin, hair, nails, teeth, and sweat glands.
Clinical significance
Mutation in this gene have been associated with hypohidrotic ectodermal dysplasia, a disorder characterized by a lower density of sweat glands.
Derived EDAR allele
A derived G-allele point mutation (SNP) with pleiotropic effects in EDAR, 370A or rs3827760, found in ancient and modern East Asians, Southeast Asians, Nepalese and Native Americans but not common in African or European populations, is thought to be one of the key genes responsible for a number of differences between these populations, including the thicker hair, more numerous sweat glands, smaller breasts, and the Sinodont dentition (so-called shovel incisors) characteristic of East Asians.
A 2013 study suggested that the EDAR variant (370A) arose about 35,000 years ago in central China, period during which the region was then quite warm and humid. However a more recent study from 2021, based on ancient DNA samples, has suggested that the derived variant actually arose shortly after the Last Glacial Maximum in Northeast Asia, around 19,000 years ago. All ancient East Asian remains after the LGM have the derived EDAR allele.
It has been hypothesized that natural selection favored this allele during the last ice age in a population of people living in isolation in Beringia, as it may play a role in the synthesis of breast milk under Vitamin D-poor conditions. One study suggested that because the EDAR mutation arose in a cool and dry environment, it may have been adaptive by increasing skin lubrication, thus reducing dryness in exposed facial structures.
The 370A mutation is found in 60-90% of Han Chinese and in the majority of people in nearby Asian populations of very specific demographic haplogroups. This mutation is also implicated in ear morphology differences and reduced chin protrusion. The derived G-allele is a variation of the A-allele in earlier hominids, the version found in most modern non-East Asian and non-Native American populations and is found in 100% of Native American skeletal remains within all Native American haplogroups which studies have been done on prior to all contract for foreign population from Africa, Europe, or Asia. The derived allele was present in both the Tibeto-Burman (Magar and Newar) and Indo-European (Brahmin) populations of Nepal. The highest 1540C allele frequency was observed in Magar (71%), followed by Newar (30%) and Brahmin (20%).
Derived variants of EDAR are associated with multiple facial and dental characteristics.
In a 2015 study, three (of six) ancient DNA samples (7,900-7,500 BP) from Motala, Sweden; two (3300–3000 BC) from the Afanasevo culture and one (400–200 BC) Scythian sample were found to carry the rs3827760 mutation.
In a 2018 study, several ancient DNA samples from the Americas, including USR1 from the Upward Sun River site, Anzick-1, and the 9,600 BP individual from Lapa do Santo, were found to not carry the derived allele. This suggests that the increased frequency of the derived allele occurred independently in both East Asia and the Americas.
See also
Further reading
- Thesleff I, Mikkola ML (May 2002). "Death receptor signaling giving life to ectodermal organs". Science's STKE. 2002 (131): pe22. doi:10.1126/stke.2002.131.pe22. PMID 11997580. S2CID 36068881.
- Ho L, Williams MS, Spritz RA (May 1998). "A gene for autosomal dominant hypohidrotic ectodermal dysplasia (EDA3) maps to chromosome 2q11-q13". American Journal of Human Genetics. 62 (5): 1102–6. doi:10.1086/301839. PMC 1377096. PMID 9545409.
- Kumar A, Eby MT, Sinha S, Jasmin A, Chaudhary PM (January 2001). "The ectodermal dysplasia receptor activates the nuclear factor-kappaB, JNK, and cell death pathways and binds to ectodysplasin A". The Journal of Biological Chemistry. 276 (4): 2668–77. doi:10.1074/jbc.M008356200. PMID 11035039.
- Yan M, Wang LC, Hymowitz SG, Schilbach S, Lee J, Goddard A, et al. (October 2000). "Two-amino acid molecular switch in an epithelial morphogen that regulates binding to two distinct receptors". Science. 290 (5491): 523–7. Bibcode:2000Sci...290..523Y. doi:10.1126/science.290.5491.523. PMID 11039935.
- Elomaa O, Pulkkinen K, Hannelius U, Mikkola M, Saarialho-Kere U, Kere J (April 2001). "Ectodysplasin is released by proteolytic shedding and binds to the EDAR protein". Human Molecular Genetics. 10 (9): 953–62. doi:10.1093/hmg/10.9.953. PMID 11309369.
- Koppinen P, Pispa J, Laurikkala J, Thesleff I, Mikkola ML (October 2001). "Signaling and subcellular localization of the TNF receptor Edar". Experimental Cell Research. 269 (2): 180–92. doi:10.1006/excr.2001.5331. PMID 11570810.
- Headon DJ, Emmal SA, Ferguson BM, Tucker AS, Justice MJ, Sharpe PT, et al. (2002). "Gene defect in ectodermal dysplasia implicates a death domain adapter in development". Nature. 414 (6866): 913–6. doi:10.1038/414913a. PMID 11780064. S2CID 4380080.
- Yan M, Zhang Z, Brady JR, Schilbach S, Fairbrother WJ, Dixit VM (March 2002). "Identification of a novel death domain-containing adaptor molecule for ectodysplasin-A receptor that is mutated in crinkled mice". Current Biology. 12 (5): 409–13. doi:10.1016/S0960-9822(02)00687-5. PMID 11882293. S2CID 9911697.
- Sinha SK, Zachariah S, Quiñones HI, Shindo M, Chaudhary PM (November 2002). "Role of TRAF3 and -6 in the activation of the NF-kappa B and JNK pathways by X-linked ectodermal dysplasia receptor". The Journal of Biological Chemistry. 277 (47): 44953–61. doi:10.1074/jbc.M207923200. PMID 12270937.
- Shu H, Chen S, Bi Q, Mumby M, Brekken DL (March 2004). "Identification of phosphoproteins and their phosphorylation sites in the WEHI-231 B lymphoma cell line". Molecular & Cellular Proteomics. 3 (3): 279–86. doi:10.1074/mcp.D300003-MCP200. PMID 14729942.
- Zhang Z, Henzel WJ (October 2004). "Signal peptide prediction based on analysis of experimentally verified cleavage sites". Protein Science. 13 (10): 2819–24. doi:10.1110/ps.04682504. PMC 2286551. PMID 15340161.
- Hashimoto T, Cui CY, Schlessinger D (April 2006). "Repertoire of mouse ectodysplasin-A (EDA-A) isoforms". Gene. 371 (1): 42–51. doi:10.1016/j.gene.2005.11.003. PMID 16423472.
- Chassaing N, Bourthoumieu S, Cossee M, Calvas P, Vincent MC (March 2006). "Mutations in EDAR account for one-quarter of non-ED1-related hypohidrotic ectodermal dysplasia". Human Mutation. 27 (3): 255–9. doi:10.1002/humu.20295. PMID 16435307. S2CID 32110651.
- Tariq M, Wasif N, Ahmad W (July 2007). "A novel deletion mutation in the EDAR gene in a Pakistani family with autosomal recessive hypohidrotic ectodermal dysplasia". The British Journal of Dermatology. 157 (1): 207–9. doi:10.1111/j.1365-2133.2007.07949.x. PMID 17501952. S2CID 310090.
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