Enzyme
|
PDB code
|
Source
|
Recognition sequence
|
Cut
|
Isoschizomers
|
HacI
|
|
Halococcus acetoinfaciens
|
5' GATC
3' CTAG
|
5' --- GATC--- 3'
3' ---CTAG --- 5'
|
Bme12I, Bsp67I, BstENII, CcyI, FnuEI, MgoI, NphI, Sau3AI
|
HaeI
|
|
Haemophilus aegyptius
|
5' WGGCCW
3' WCCGGW
|
5' ---WGG CCW--- 3'
3' ---WCC GGW--- 5'
|
|
HaeII
|
|
Haemophilus aegypticus
|
5' RGCGCY
3' YCGCGR
|
5' ---RGCGC Y--- 3'
3' ---Y CGCGR--- 5'
|
AccB2I,
|
BfoI,
|
Bme142I,
|
Bsp143II, BstH2I, LpnI
|
|
HaeIII
|
|
Haemophilus aegypticus
|
5' GGCC
3' CCGG
|
5' ---GG CC--- 3'
3' ---CC GG--- 5'
|
BsuRI
|
HaeIV
|
|
Haemophilus aegyptius
|
5' GAYN5RTC
3' CTRN5YAG
|
5' ---GAYN5RTCN8NNNNNN --- 3'
3' ---CTRN5YAGN8N NNNNN--- 5'
|
|
HalI
|
|
Hafnia alvei B6
|
5' GAATTC
3' CTTAAG
|
5' ---G AATTC--- 3'
3' ---CTTAA G--- 5'
|
|
HalII
|
|
Hafnia alvei B6
|
5' CTGCAG
3' GACGTC
|
5' ---CTGCA G--- 3'
3' ---G ACGTC--- 5'
|
AjoI, AliAJI, Bsp63I, CfrA4I, CfuII, CstI, PstI, SflI, Srl5DI, Sst12I
|
HapII
|
|
Haemophilus aphrophilus
|
5' CCGG
3' GGCC
|
5' ---C CGG--- 3'
3' ---GGC C--- 5'
|
|
HgaI
|
|
Haemophilus gallinarum
|
5' GACGC
3' CTGCG
|
5' ---GACGCN4N NNNNN--- 3'
3' ---CTGCGN4NNNNNN --- 5'
|
|
HgiI
|
|
Herpetosiphon giganteus 3303
|
5' GRCGYC
3' CYGCRG
|
5' ---GR CGYC--- 3'
3' ---CYGC RG--- 5'
|
AcyI, AsuIII, BbiII, BstACI, HgiGI, HgiHII, Hin1I, PamII
|
HgiAI
|
|
Herpetosiphon giganteus HP1023
|
5' GWGCWC
3' CWCGWG
|
5' ---GWGCW C--- 3'
3' ---C WCGWG--- 5'
|
Alw21I, AspHI, Bsh45I, BsiHKAI,
|
Bsm6I, HpyF46II,
|
MspV281I
|
|
HgiBI
|
|
Herpetosiphon giganteus Hpg5
|
5' GGWCC
3' CCWGG
|
5' ---G GWCC--- 3'
3' ---CCWG G--- 5'
|
Bme18I, BthAI, DsaIV, ErpI, FspMSI, HgiEI, Psp03I, VpaK11AI
|
HgiCI
|
|
Herpetosiphon giganteus Hpg9
|
5' GGYRCC
3' CCRYGG
|
5' ---G GYRCC--- 3'
3' ---CCRYG G--- 5'
|
AccB1I, BanI, BspT107I, BshNI, Eco64I, HgiHI, MspB4I, PfaAI
|
HgiCII
|
|
Herpetosiphon giganteus Hpg9
|
5' GGWCC
3' CCWGG
|
5' ---G GWCC--- 3'
3' ---CCWG G--- 5'
|
Bme18I, BthAI, DsaIV, FspMSI, HgiHIII, Psp03I, VpaK11AI
|
HgiCIII
|
|
Herpetosiphon giganteus Hpg9
|
5' GTCGAC
3' CAGCTG
|
5' ---G TCGAC--- 3'
3' ---CAGCT G--- 5'
|
|
HgiDI
|
|
Herpetosiphon giganteus Hpa2
|
5' GRCGYC
3' CYGCRG
|
5' ---GR CGYC--- 3'
3' ---CYGC RG--- 5'
|
AcyI, AsuIII, BbiII, BstACI, HgiGI, HgiI, Hin1I, PamII
|
HgiDII
|
|
Herpetosiphon giganteus Hpa2
|
5' GTCGAC
3' CAGCTG
|
5' ---G TCGAC--- 3'
3' ---CAGCT G--- 5'
|
|
HgiEI
|
|
Herpetosiphon giganteus Hpg24
|
5' GGWCC
3' CCWGG
|
5' ---G GWCC--- 3'
3' ---CCWG G--- 5'
|
Bme216I, BthAI, DsaIV, ErpI, FspMSI, HgiHIII, VpaK11AI
|
HgiGI
|
|
Herpetosiphon giganteus Hpa1
|
5' GRCGYC
3' CYGCRG
|
5' ---GR CGYC--- 3'
3' ---CYGC RG--- 5'
|
AcyI, AosII, BbiII, BstACI, HgiI, HgiGI, Msp17I, PamII
|
HgiHI
|
|
Herpetosiphon giganteus HP1049
|
5' GGYRCC
3' CCRYGG
|
5' ---G GYRCC--- 3'
3' ---CCRYG G--- 5'
|
AccB1I, BanI, BspT107I, BshNI, Eco64I, HgiCI, MspB4I, PfaAI
|
HgiHII
|
|
Herpetosiphon giganteus HP1049
|
5' GRCGYC
3' CYGCRG
|
5' ---GR CGYC--- 3'
3' ---CYGC RG--- 5'
|
AosII, AsuIII, BsaHI, BstACI, HgiGI, HgiHII, Msp17I, PamII
|
HgiHIII
|
|
Herpetosiphon giganteus HP1049
|
5' GGWCC
3' CCWGG
|
5' ---G GWCC--- 3'
3' ---CCWG G--- 5'
|
Bme216I, DsaIV, ErpI, HgiBI, Psp03I, VpaK11AI, VpaK11BI
|
HgiJI
|
|
Herpetosiphon giganteus HFS101
|
5' GGWCC
3' CCWGG
|
5' ---G GWCC--- 3'
3' ---CCWG G--- 5'
|
Bme216I, CauI, DsaIV, FdiI, HgiBI, HgiHIII, Psp03I, VpaK11AI
|
HgiJII
|
|
Herpetosiphon giganteus HFS101
|
5' GRGCYC
3' CYCGRG
|
5' ---GRGCY C--- 3'
3' ---C YCGRG--- 5'
|
|
HgiS22I
|
|
Herpetosiphon giganteus
|
5' CCSGG
3' GGSCC
|
5' ---CC SGG--- 3'
3' ---GGS CC--- 5'
|
AhaI, AseII, AsuC2I, BcnI, CauII, Eco1831I, EcoHI, Kpn49kII
|
HhaI
|
|
Haemophilus haemolyticus
|
5' GCGC
3' CGCG
|
5' ---GCG C--- 3'
3' ---C GCG--- 5'
|
AspLEI, BspLAI, BstHHI, CfoI, FnuDIII, Hin6I, HinP1I, SciNI
|
HhaII
|
|
Haemophilus haemolyticus
|
5' GANTC
3' CTNAG
|
5' ---G ANTC--- 3'
3' ---CTNA G--- 5'
|
|
Hin1I
|
|
Haemophilus influenzae RFL1
|
5' GRCGYC
3' CYGCRG
|
5' ---GR CGYC--- 3'
3' ---CYGC RG--- 5'
|
AcyI, AhaII, AosII, AstWI, AsuIII, HgiI, HgiDI, HgiDI, Hsp92I
|
Hin1II
|
|
Haemophilus influenzae RFL1
|
5' CATG
3' GTAC
|
5' ---CATG --- 3'
3' --- GTAC--- 5'
|
|
Hin2I
|
|
Haemophilus influenzae RFL2
|
5' CCGG
3' GGCC
|
5' ---C CGG--- 3'
3' ---GGC C--- 5'
|
|
Hin4I
|
|
Haemophilus influenzae RFL4
|
5' GAYN5VTC
3' CTRN5BAG
|
5' ---GAYN5VTCN7NNNNNN --- 3'
3' ---CTRN5BAGN7N NNNNN--- 5'
|
|
Hin6I
|
|
Haemophilus influenzae RFL6
|
5' GCGC
3' CGCG
|
5' ---G CGC--- 3'
3' ---CGC G--- 5'
|
AspLEI, BspLAI, BstHHI, CfoI, FnuDIII, HhaI, HsoI, HspAI, SciNI
|
HinJCI
|
|
Haemophilus influenzae JC9
|
5' GTYRAC
3' CARYTG
|
5' ---GTY RAC--- 3'
3' ---CAR YTG--- 5'
|
|
HinP1I
|
2FL3 Search PDBe
|
Haemophilus influenzae P1
|
5' GCGC
3' CGCG
|
5' ---G CGC--- 3'
3' ---CGC G--- 5'
|
BspLAI, BstHHI, CfoI, FnuDIII, HhaI, Hin6I, HsoI, HspAI, SciNI
|
HincII
|
2AUD Search PDBe
|
Haemophilus influenzae Rc
|
5' GTYRAC
3' CARYTG
|
5' ---GTY RAC--- 3'
3' ---CAR YTG--- 5'
|
|
HindII
|
|
Haemophilus influenzae Rd
|
5' GTYRAC
3' CARYTG
|
5' ---GTY RAC--- 3'
3' ---CAR YTG--- 5'
|
|
HindIII
|
2E52, Search PDBe
|
Haemophilus influenzae Rd
|
5' AAGCTT
3' TTCGAA
|
5' ---A AGCTT--- 3'
3' ---TTCGA A--- 5'
|
|
HinfI
|
|
Haemophilus influenzae Rf
|
5' GANTC
3' CTNAG
|
5' ---G ANTC--- 3'
3' ---CTNA G--- 5'
|
|
HjaI
|
|
Hyphomonas jannaschiana
|
5' GATATC
3' CTATAG
|
5' ---GAT ATC--- 3'
3' ---CTA TAG--- 5'
|
|
HpaI
|
|
Haemophilus parainfluenzae
|
5' GTTAAC
3' CAATTG
|
5' ---GTT AAC--- 3'
3' ---CAA TTG--- 5'
|
|
HpaII
|
|
Haemophilus parainfluenzae
|
5' CCGG
3' GGCC
|
5' ---C CGG--- 3'
3' ---GGC C--- 5'
|
|
HphI
|
|
Haemophilus parahaemolyticus
|
5' GGTGA
3' CCACT
|
5' ---GGTGAN6NN --- 3'
3' ---CCACTN6N N--- 5'
|
AsuHPI, SspD5I
|
Hpy8I
|
|
Helicobacter pylori A 8-5
|
5' GTNNAC
3' CANNTG
|
5' ---GTN NAC--- 3'
3' ---CAN NTG--- 5'
|
|
Hpy51I
|
|
Helicobacter pylori 51
|
5' GTSAC
3' CASTG
|
5' --- GTSAC--- 3'
3' ---CASTG --- 5'
|
|
Hpy99I
|
3GOX
|
Helicobacter pylori J99
|
5' CGWCG
3' GCWGC
|
5' ---CGWCG --- 3'
3' --- GCWGC--- 5'
|
|
Hpy178III
|
|
Helicobacter pylori J178
|
5' TCNNGA
3' AGNNCT
|
5' ---TC NNGA--- 3'
3' ---AGNN CT--- 5'
|
|
Hpy188I
|
|
Helicobacter pylori J188
|
5' TCNGA
3' AGNCT
|
5' ---TCN GA--- 3'
3' ---AG NCT--- 5'
|
|
Hpy188III
|
|
Helicobacter pylori J188
|
5' TCNNGA
3' AGNNCT
|
5' ---TC NNGA--- 3'
3' ---AGNN CT--- 5'
|
|
HpyAV
|
|
Helicobacter pylori 26695
|
5' CCTTC
3' GGAAG
|
5' ---CCTTCN4NN --- 3'
3' ---GGAAGN4N N--- 5'
|
|
HpyBI
|
|
Helicobacter pylori Roberts
|
5' GTAC
3' CATG
|
5' ---GT AC--- 3'
3' ---CA TG--- 5'
|
AfaI, Csp6I, CviQI, CviRII, PabI, PlaAII, RsaI, RsaNI
|
HpyBII
|
|
Helicobacter pylori Roberts
|
5' GTNNAC
3' CANNTG
|
5' ---GTN NAC--- 3'
3' ---CAN NTG--- 5'
|
|
HpyCI
|
|
Helicobacter pylori
|
5' GATATC
3' CTATAG
|
5' ---GAT ATC--- 3'
3' ---CTA TAG--- 5'
|
|
HpyC1I
|
|
Helicobacter pylori
|
5' CCATC
3' GGTAG
|
5' ---CCATCNNNN N--- 3'
3' ---GGTAGNNNNN --- 5'
|
|
HpyCH4I
|
|
Helicobacter pylori CH4
|
5' CATG
3' GTAC
|
5' ---CATG --- 3'
3' --- GTAC--- 5'
|
|
HpyCH4III
|
|
Helicobacter pylori CH4
|
5' ACNGT
3' TGNCA
|
5' ---ACN GT--- 3'
3' ---TG NCA--- 5'
|
|
HpyCH4IV
|
|
Helicobacter pylori CH4
|
5' ACGT
3' TGCA
|
5' ---A CGT--- 3'
3' ---TGC A--- 5'
|
|
HpyCH4V
|
|
Helicobacter pylori CH4
|
5' TGCA
3' ACGT
|
5' ---TG CA--- 3'
3' ---AC GT--- 5'
|
|
HpyF10VI
|
|
Helicobacter pylori RFL10
|
5' GCN7GC
3' CGN7CG
|
5' ---GCNNNNN NNGC--- 3'
3' ---CGNN NNNNNCG--- 5'
|
|
HpyF44III
|
|
Helicobacter pylori RFL44
|
5' TGCA
3' ACGT
|
5' ---TG CA--- 3'
3' ---AC GT--- 5'
|
|
HsoI
|
|
Haemophilus somnus 2336
|
5' GCGC
3' CGCG
|
5' ---G CGC--- 3'
3' ---CGC G--- 5'
|
AspLEI, BstHHI, CfoI, FnuDIII, Hin6I, HinP1I, HspAI, SciNI
|
Hsp92I
|
|
Haemophilus sp. 92
|
5' GRCGYC
3' CYGCRG
|
5' ---GR CGYC--- 3'
3' ---CYGC RG--- 5'
|
AcyI, AhaII, AosII, AstWI, HgiI, HgiDI, HgiHII, Hin1I, Hsp92I
|
Hsp92II
|
|
Haemophilus sp. 92
|
5' CATG
3' GTAC
|
5' ---CATG --- 3'
3' --- GTAC--- 5'
|
|
HspAI
|
|
Haemophilus sp. A
|
5' GCGC
3' CGCG
|
5' ---G CGC--- 3'
3' ---CGC G--- 5'
|
AspLEI, BspLAI, BstHHI, FnuDIII, HhaI, Hin6I, HinP1I, HsoI, SciNI
|
HsuI
|
|
Haemophilus suis
|
5' AAGCTT
3' TTCGAA
|
5' ---A AGCTT--- 3'
3' ---TTCGA A--- 5'
|
|